Custom CSS - In child theme vs. betheme>options

General question:
What is the difference between using the child theme to add custom CSS versus using the custom CSS field in the betheme>options>custom CSS?
Is there a preferred and/or 'best practice' in regards to adding custom CSS?

I've found that sometimes putting CSS is one place versus the other gives me different results (sometimes the code changes will display if code is in one place and not the other, or sometimes I have to put code in both for it to work)...

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